_allele1 | Genotype | [private] |
_allele2 | Genotype | [private] |
_alternateDelimiter | Genotype | [private, static] |
_genotype | Genotype | [private] |
_genotypeMissingValue | Genotype | [private, static] |
_isMissing | Genotype | [private] |
_isSNP | Genotype | [private] |
_itoa(unsigned int i) const | Genotype | [private] |
_missingValue | Data | [protected, static] |
_normalDelimiter | Genotype | [private, static] |
_orderAlleles(void) | Genotype | [private] |
_setAllele(const char *input, unsigned &value, bool &snp) | Genotype | [private] |
_setNormalizedStringRepresentation(void) | Genotype | [private] |
_snpOrdinalToCString(unsigned int allele) | Genotype | [private] |
addGenotypeMissingValue(std::string &value) | Genotype | [inline, static] |
addGlobalMissingValue(std::string value) | Data | [static] |
clone() const | Genotype | [virtual] |
Data() | Data | [inline] |
Genotype() | Genotype | [inline] |
Genotype(const char *g) | Genotype | [inline] |
Genotype(const std::string &g) | Genotype | [inline] |
Genotype(const int allele1, const int allele2) | Genotype | [inline] |
get(void) const | Genotype | [virtual] |
getAllele1(void) const | Genotype | [inline] |
getAllele2(void) const | Genotype | [inline] |
getDataType(void) const | Genotype | [inline, virtual] |
isA(const std::string &s) | Genotype | [static] |
isGlobalMissingValue(std::string value) | Data | [static] |
isMissing(void) const | Genotype | [inline, virtual] |
isMissingValue(std::string value) | Genotype | [static] |
operator+=(const int allele) | Genotype | |
operator+=(const Number &allele) | Genotype | |
operator-=(const int allele) | Genotype | |
operator-=(const Number &allele) | Genotype | |
operator<(const Data &b) const | Genotype | [virtual] |
operator==(const Data &b) const | Genotype | [virtual] |
set(const char *genotype) | Genotype | [virtual] |
set(const std::string &genotype) | Genotype | [virtual] |
set(const int allele1, const int allele2) | Genotype | |
setAllele1(const int allele1) | Genotype | |
setAllele1(const char *allele1) | Genotype | |
setAllele1(const std::string &allele1) | Genotype | |
setAllele2(const int allele2) | Genotype | |
setAllele2(const char *allele2) | Genotype | |
setAllele2(const std::string &allele2) | Genotype | |
setMissing(void) | Genotype | [inline, virtual] |
SNP_A_ORDINAL enum value | Genotype | |
SNP_C_ORDINAL enum value | Genotype | |
SNP_G_ORDINAL enum value | Genotype | |
SNP_T_ORDINAL enum value | Genotype | |
trim(std::string &s, const std::string &drop=" ") | Data | [static] |
~Data() | Data | [inline, virtual] |